Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 AC027612.3-201ENST00000413684 1047 ntBASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 MIR6084-201ENST00000622012 110 ntBASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRDM9Q9NQV7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 C11orf96-202ENST00000528572 1834 ntBASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRDM9Q9NQV7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 RARRES2P6-201ENST00000567333 442 ntBASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
PRDM9Q9NQV7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.33■□□□□ 0.84
PRDM9Q9NQV7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PRDM9Q9NQV7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRDM9Q9NQV7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 YBX1P1-201ENST00000445822 960 ntBASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM9Q9NQV7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.31■□□□□ 0.84
PRDM9Q9NQV7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 AC097381.1-201ENST00000429019 1296 ntBASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 AC123595.1-201ENST00000440769 1046 ntBASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 MIR6821-201ENST00000617625 74 ntBASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms