Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR1BQ9H9Y6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 AC016769.1-201ENST00000409132 1010 ntBASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.19■□□□□ 0.98
POLR1BQ9H9Y6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 AC137761.2-201ENST00000561729 223 ntBASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 AC145350.3-201ENST00000569033 163 ntBASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
POLR1BQ9H9Y6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1BQ9H9Y6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 GUSBP5-202ENST00000510805 1989 ntBASIC21.16■□□□□ 0.98
POLR1BQ9H9Y6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 RAP2CP1-201ENST00000605103 478 ntBASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
POLR1BQ9H9Y6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
POLR1BQ9H9Y6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
POLR1BQ9H9Y6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.14■□□□□ 0.98
POLR1BQ9H9Y6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.14■□□□□ 0.98
POLR1BQ9H9Y6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
POLR1BQ9H9Y6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
POLR1BQ9H9Y6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 AC073111.5-205ENST00000641717 521 ntBASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms