Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 AC090192.1-201ENST00000517740 490 ntBASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
MINDY3Q9H8M7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 AC137761.2-201ENST00000561729 223 ntBASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 AC145350.3-201ENST00000569033 163 ntBASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.59■■□□□ 1.37
MINDY3Q9H8M7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
MINDY3Q9H8M7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
MINDY3Q9H8M7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.58■■□□□ 1.36
MINDY3Q9H8M7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MINDY3Q9H8M7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 KRT87P-202ENST00000534226 1464 ntBASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 KRT19P1-201ENST00000405746 1186 ntBASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MINDY3Q9H8M7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 AC104187.1-201ENST00000607510 612 ntBASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MINDY3Q9H8M7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 AC080038.3-201ENST00000623346 1952 ntBASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 ESRRAP2-201ENST00000418437 1549 ntBASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.54■■□□□ 1.36
MINDY3Q9H8M7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms