Protein–RNA interactions for Protein: Q9H7U1

CCSER2, Serine-rich coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2Q9H7U1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCSER2Q9H7U1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 AC137761.2-201ENST00000561729 223 ntBASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 AC145350.3-201ENST00000569033 163 ntBASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCSER2Q9H7U1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 RARRES2P11-201ENST00000635158 484 ntBASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 KRT87P-202ENST00000534226 1464 ntBASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCSER2Q9H7U1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCSER2Q9H7U1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
CCSER2Q9H7U1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCSER2Q9H7U1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCSER2Q9H7U1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 KRT19P1-201ENST00000405746 1186 ntBASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 AC006015.1-201ENST00000429970 570 ntBASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 AL034346.1-201ENST00000568244 1277 ntBASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCSER2Q9H7U1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 AC016769.1-201ENST00000409132 1010 ntBASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 AC090192.1-201ENST00000517740 490 ntBASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.37■■□□□ 1.17
CCSER2Q9H7U1 AC104187.1-201ENST00000607510 612 ntBASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms