Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 SLC47A1P1-202ENST00000449666 945 ntBASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 LINC01529-204ENST00000636474 1715 ntBASIC22.33■■□□□ 1.17
KDM4CQ9H3R0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KDM4CQ9H3R0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.33■■□□□ 1.16
KDM4CQ9H3R0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KDM4CQ9H3R0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.33■■□□□ 1.16
KDM4CQ9H3R0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
KDM4CQ9H3R0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 AC092053.2-201ENST00000640557 1818 ntBASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 OR2I1P-207ENST00000453522 948 ntBASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.31■■□□□ 1.16
KDM4CQ9H3R0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM4CQ9H3R0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 IGHV3-19-201ENST00000521488 291 ntBASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 AC026310.3-201ENST00000625186 2373 ntBASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM4CQ9H3R0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 AC104564.3-201ENST00000582367 638 ntBASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
KDM4CQ9H3R0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms