Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
VRK1Q99986 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.89■□□□□ 0.61
VRK1Q99986 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VRK1Q99986 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VRK1Q99986 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VRK1Q99986 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VRK1Q99986 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.88■□□□□ 0.61
VRK1Q99986 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK1Q99986 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.88■□□□□ 0.61
VRK1Q99986 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.88■□□□□ 0.61
VRK1Q99986 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
VRK1Q99986 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
VRK1Q99986 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK1Q99986 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK1Q99986 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.88■□□□□ 0.61
VRK1Q99986 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VRK1Q99986 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.88■□□□□ 0.61
VRK1Q99986 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK1Q99986 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VRK1Q99986 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VRK1Q99986 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.87■□□□□ 0.61
VRK1Q99986 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VRK1Q99986 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VRK1Q99986 AC010525.1-201ENST00000585559 441 ntBASIC18.87■□□□□ 0.61
VRK1Q99986 AC079630.1-202ENST00000618127 1840 ntBASIC18.87■□□□□ 0.61
VRK1Q99986 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.87■□□□□ 0.61
VRK1Q99986 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VRK1Q99986 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VRK1Q99986 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK1Q99986 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.86■□□□□ 0.61
VRK1Q99986 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VRK1Q99986 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.86■□□□□ 0.61
VRK1Q99986 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK1Q99986 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.86■□□□□ 0.61
VRK1Q99986 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.86■□□□□ 0.61
VRK1Q99986 MIR6821-201ENST00000617625 74 ntBASIC18.86■□□□□ 0.61
VRK1Q99986 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK1Q99986 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VRK1Q99986 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
VRK1Q99986 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
VRK1Q99986 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VRK1Q99986 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.85■□□□□ 0.61
VRK1Q99986 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.85■□□□□ 0.61
VRK1Q99986 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VRK1Q99986 AC097381.1-201ENST00000429019 1296 ntBASIC18.85■□□□□ 0.61
VRK1Q99986 IGHV3-19-201ENST00000521488 291 ntBASIC18.85■□□□□ 0.61
VRK1Q99986 AC092666.2-201ENST00000613287 246 ntBASIC18.85■□□□□ 0.61
VRK1Q99986 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
VRK1Q99986 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.85■□□□□ 0.61
VRK1Q99986 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VRK1Q99986 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK1Q99986 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
VRK1Q99986 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VRK1Q99986 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.84■□□□□ 0.61
VRK1Q99986 OR2I1P-207ENST00000453522 948 ntBASIC18.84■□□□□ 0.61
VRK1Q99986 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK1Q99986 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
VRK1Q99986 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK1Q99986 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK1Q99986 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK1Q99986 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
VRK1Q99986 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms