Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LITAFQ99732 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.37□□□□□ -0.11
LITAFQ99732 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.37□□□□□ -0.11
LITAFQ99732 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
LITAFQ99732 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.36□□□□□ -0.11
LITAFQ99732 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.36□□□□□ -0.11
LITAFQ99732 AL020996.1-203ENST00000536896 2307 ntBASIC14.36□□□□□ -0.11
LITAFQ99732 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 AC004448.1-201ENST00000458332 883 ntBASIC14.36□□□□□ -0.11
LITAFQ99732 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.36□□□□□ -0.11
LITAFQ99732 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LITAFQ99732 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.36□□□□□ -0.11
LITAFQ99732 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.35□□□□□ -0.11
LITAFQ99732 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.35□□□□□ -0.11
LITAFQ99732 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC14.35□□□□□ -0.11
LITAFQ99732 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LITAFQ99732 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LITAFQ99732 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.35□□□□□ -0.11
LITAFQ99732 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.35□□□□□ -0.11
LITAFQ99732 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LITAFQ99732 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
LITAFQ99732 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LITAFQ99732 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.34□□□□□ -0.11
LITAFQ99732 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.34□□□□□ -0.11
LITAFQ99732 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.34□□□□□ -0.11
LITAFQ99732 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.34□□□□□ -0.11
LITAFQ99732 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 LONRF2P2-201ENST00000439212 571 ntBASIC14.34□□□□□ -0.11
LITAFQ99732 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.34□□□□□ -0.11
LITAFQ99732 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
LITAFQ99732 AC018755.3-202ENST00000596210 929 ntBASIC14.34□□□□□ -0.11
LITAFQ99732 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
LITAFQ99732 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.34□□□□□ -0.11
LITAFQ99732 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.34□□□□□ -0.11
LITAFQ99732 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC14.34□□□□□ -0.11
LITAFQ99732 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LITAFQ99732 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.34□□□□□ -0.11
LITAFQ99732 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.34□□□□□ -0.11
LITAFQ99732 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LITAFQ99732 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LITAFQ99732 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LITAFQ99732 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.33□□□□□ -0.11
LITAFQ99732 AC026471.6-201ENST00000622954 1905 ntBASIC14.33□□□□□ -0.11
LITAFQ99732 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms