Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 LINC01960-201ENST00000563759 1884 ntBASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
SCGB3A1Q96QR1 AC009831.1-201ENST00000580420 1582 ntBASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 AF106564.1-201ENST00000607058 2553 ntBASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 FEM1AP4-201ENST00000443167 1987 ntBASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.36■□□□□ 0.05
SCGB3A1Q96QR1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCGB3A1Q96QR1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCGB3A1Q96QR1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.33■□□□□ 0.05
SCGB3A1Q96QR1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SCGB3A1Q96QR1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCGB3A1Q96QR1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.33■□□□□ 0.05
SCGB3A1Q96QR1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 RNF165-205ENST00000588679 2904 ntBASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCGB3A1Q96QR1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCGB3A1Q96QR1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms