Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE2Q96FN4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 AC092171.4-201ENST00000609130 632 ntBASIC18.61■□□□□ 0.57
CPNE2Q96FN4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.61■□□□□ 0.57
CPNE2Q96FN4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 KRT16P3-201ENST00000439127 1283 ntBASIC18.6■□□□□ 0.57
CPNE2Q96FN4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE2Q96FN4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 AL451085.2-201ENST00000605085 799 ntBASIC18.59■□□□□ 0.57
CPNE2Q96FN4 AC087239.1-201ENST00000622671 572 ntBASIC18.59■□□□□ 0.57
CPNE2Q96FN4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE2Q96FN4 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.59■□□□□ 0.57
CPNE2Q96FN4 AC133637.1-201ENST00000624115 1537 ntBASIC18.59■□□□□ 0.57
CPNE2Q96FN4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.58■□□□□ 0.57
CPNE2Q96FN4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE2Q96FN4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 UNC93B8-201ENST00000511903 705 ntBASIC18.57■□□□□ 0.56
CPNE2Q96FN4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 AL356740.2-201ENST00000601559 647 ntBASIC18.57■□□□□ 0.56
CPNE2Q96FN4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.57■□□□□ 0.56
CPNE2Q96FN4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE2Q96FN4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE2Q96FN4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE2Q96FN4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.56■□□□□ 0.56
CPNE2Q96FN4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms