Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3KBP1Q96B97 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 LINC01960-201ENST00000563759 1884 ntBASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3KBP1Q96B97 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SH3KBP1Q96B97 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3KBP1Q96B97 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 OXCT2P1-201ENST00000447263 1535 ntBASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 CCDC92B-201ENST00000575506 885 ntBASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3KBP1Q96B97 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 DUX4L2-201ENST00000561772 1275 ntBASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
SH3KBP1Q96B97 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms