Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.21■□□□□ 0.83
PSD4Q8NDX1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 AP005435.1-201ENST00000529293 1178 ntBASIC20.2■□□□□ 0.82
PSD4Q8NDX1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.2■□□□□ 0.82
PSD4Q8NDX1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSD4Q8NDX1 AL121603.2-201ENST00000557373 2117 ntBASIC20.2■□□□□ 0.82
PSD4Q8NDX1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 MIR6821-201ENST00000617625 74 ntBASIC20.19■□□□□ 0.82
PSD4Q8NDX1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSD4Q8NDX1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 MIR572-201ENST00000384983 95 ntBASIC20.18■□□□□ 0.82
PSD4Q8NDX1 AC097381.1-201ENST00000429019 1296 ntBASIC20.18■□□□□ 0.82
PSD4Q8NDX1 MIR5787-201ENST00000611784 55 ntBASIC20.18■□□□□ 0.82
PSD4Q8NDX1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSD4Q8NDX1 AC242852.2-201ENST00000615738 1807 ntBASIC20.18■□□□□ 0.82
PSD4Q8NDX1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSD4Q8NDX1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.16■□□□□ 0.82
PSD4Q8NDX1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PSD4Q8NDX1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms