Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIML2Q8N7C3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIML2Q8N7C3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIML2Q8N7C3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIML2Q8N7C3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIML2Q8N7C3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIML2Q8N7C3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIML2Q8N7C3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 C17orf82-201ENST00000623772 1530 ntBASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 AC009299.2-201ENST00000482477 511 ntBASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIML2Q8N7C3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRIML2Q8N7C3 AC004687.1-201ENST00000579003 1625 ntBASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIML2Q8N7C3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
TRIML2Q8N7C3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIML2Q8N7C3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIML2Q8N7C3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIML2Q8N7C3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 MIR6724-1-201ENST00000616420 92 ntBASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 MIR6724-2-201ENST00000616483 92 ntBASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 MIR6724-4-201ENST00000617390 92 ntBASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 MIR6724-3-201ENST00000622482 92 ntBASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms