Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 RASA4CP-201ENST00000424092 1398 ntBASIC20.77■□□□□ 0.92
KRT78Q8N1N4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 AC091305.1-201ENST00000479476 895 ntBASIC20.77■□□□□ 0.92
KRT78Q8N1N4 AF213884.3-201ENST00000563833 479 ntBASIC20.77■□□□□ 0.92
KRT78Q8N1N4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT78Q8N1N4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
KRT78Q8N1N4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.77■□□□□ 0.91
KRT78Q8N1N4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KRT78Q8N1N4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 MIR939-201ENST00000401314 82 ntBASIC20.76■□□□□ 0.91
KRT78Q8N1N4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT78Q8N1N4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT78Q8N1N4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT78Q8N1N4 AL034346.1-201ENST00000568244 1277 ntBASIC20.74■□□□□ 0.91
KRT78Q8N1N4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT78Q8N1N4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
KRT78Q8N1N4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT78Q8N1N4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT78Q8N1N4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.73■□□□□ 0.91
KRT78Q8N1N4 AL031432.3-201ENST00000607698 485 ntBASIC20.73■□□□□ 0.91
KRT78Q8N1N4 AL136967.2-201ENST00000623968 743 ntBASIC20.73■□□□□ 0.91
KRT78Q8N1N4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT78Q8N1N4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT78Q8N1N4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 AC142381.2-201ENST00000566120 298 ntBASIC20.72■□□□□ 0.91
KRT78Q8N1N4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 TSPY26P-201ENST00000476365 1326 ntBASIC20.72■□□□□ 0.91
KRT78Q8N1N4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT78Q8N1N4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms