Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.78■■□□□ 1.08
SRRM1Q8IYB3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM1Q8IYB3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.77■■□□□ 1.07
SRRM1Q8IYB3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
SRRM1Q8IYB3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM1Q8IYB3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM1Q8IYB3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM1Q8IYB3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM1Q8IYB3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.76■■□□□ 1.07
SRRM1Q8IYB3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM1Q8IYB3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM1Q8IYB3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
SRRM1Q8IYB3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SRRM1Q8IYB3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.73■■□□□ 1.07
SRRM1Q8IYB3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 MIR4508-201ENST00000584178 70 ntBASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM1Q8IYB3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms