Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM42Q8IWZ5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM42Q8IWZ5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRIM42Q8IWZ5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 AL035685.1-201ENST00000636663 812 ntBASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM42Q8IWZ5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
TRIM42Q8IWZ5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 AC009299.2-201ENST00000482477 511 ntBASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM42Q8IWZ5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 LINC01521-201ENST00000504184 1943 ntBASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM42Q8IWZ5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms