Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 LETM1P2-201ENST00000597330 2178 ntBASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 AC026471.1-201ENST00000564629 3026 ntBASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CROCCP3Q8IVE0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 AC018445.3-201ENST00000624177 1945 ntBASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CROCCP3Q8IVE0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.46■□□□□ 0.71
CROCCP3Q8IVE0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CROCCP3Q8IVE0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms