Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRTM4Q86VH4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 AC080038.3-201ENST00000623346 1952 ntBASIC21.16■□□□□ 0.98
LRRTM4Q86VH4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRTM4Q86VH4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRTM4Q86VH4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LRRTM4Q86VH4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.14■□□□□ 0.98
LRRTM4Q86VH4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LRRTM4Q86VH4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LRRTM4Q86VH4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LRRTM4Q86VH4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
LRRTM4Q86VH4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRTM4Q86VH4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LRRTM4Q86VH4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 KRT18P5-201ENST00000436075 1291 ntBASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 AC079140.4-201ENST00000507448 529 ntBASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms