Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF546Q86UE3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF546Q86UE3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF546Q86UE3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF546Q86UE3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF546Q86UE3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF546Q86UE3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 MIR7108-201ENST00000614319 87 ntBASIC17.86■□□□□ 0.45
ZNF546Q86UE3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF546Q86UE3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF546Q86UE3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 AL592295.1-201ENST00000400984 884 ntBASIC17.84■□□□□ 0.45
ZNF546Q86UE3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 RPS2P7-201ENST00000447334 885 ntBASIC17.84■□□□□ 0.45
ZNF546Q86UE3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF546Q86UE3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ZNF546Q86UE3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF546Q86UE3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF546Q86UE3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF546Q86UE3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF546Q86UE3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF546Q86UE3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ZNF546Q86UE3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms