Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 AP004607.7-201ENST00000527152 1677 ntBASIC23.75■■□□□ 1.39
RSPH3Q86UC2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 OR7E47P-201ENST00000546390 1422 ntBASIC23.75■■□□□ 1.39
RSPH3Q86UC2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.74■■□□□ 1.39
RSPH3Q86UC2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 AL034346.1-201ENST00000568244 1277 ntBASIC23.74■■□□□ 1.39
RSPH3Q86UC2 MFSD11-216ENST00000590393 1141 ntBASIC23.74■■□□□ 1.39
RSPH3Q86UC2 AC104771.1-201ENST00000603335 964 ntBASIC23.74■■□□□ 1.39
RSPH3Q86UC2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.74■■□□□ 1.39
RSPH3Q86UC2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 MIR663A-201ENST00000385250 93 ntBASIC23.73■■□□□ 1.39
RSPH3Q86UC2 NCF1B-203ENST00000435988 1254 ntBASIC23.73■■□□□ 1.39
RSPH3Q86UC2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 AP001160.3-201ENST00000601484 763 ntBASIC23.73■■□□□ 1.39
RSPH3Q86UC2 AL109923.1-201ENST00000618799 583 ntBASIC23.73■■□□□ 1.39
RSPH3Q86UC2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RSPH3Q86UC2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 AC231657.2-201ENST00000624556 255 ntBASIC23.72■■□□□ 1.39
RSPH3Q86UC2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RSPH3Q86UC2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPH3Q86UC2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.39
RSPH3Q86UC2 DUSP8P5-201ENST00000422884 1815 ntBASIC23.7■■□□□ 1.39
RSPH3Q86UC2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 GPX1P1-201ENST00000388829 606 ntBASIC23.7■■□□□ 1.38
RSPH3Q86UC2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 UBE2DNL-204ENST00000602536 740 ntBASIC23.7■■□□□ 1.38
RSPH3Q86UC2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.7■■□□□ 1.38
RSPH3Q86UC2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RSPH3Q86UC2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RSPH3Q86UC2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RSPH3Q86UC2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
RSPH3Q86UC2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
RSPH3Q86UC2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RSPH3Q86UC2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RSPH3Q86UC2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RSPH3Q86UC2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms