Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COLCA1Q6ZS62 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.6■□□□□ 0.57
COLCA1Q6ZS62 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 TSPY26P-201ENST00000476365 1326 ntBASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 AC010542.4-201ENST00000563151 1910 ntBASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COLCA1Q6ZS62 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.58■□□□□ 0.57
COLCA1Q6ZS62 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COLCA1Q6ZS62 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.58■□□□□ 0.57
COLCA1Q6ZS62 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COLCA1Q6ZS62 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COLCA1Q6ZS62 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 AP004607.7-201ENST00000527152 1677 ntBASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 MIR572-201ENST00000384983 95 ntBASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 AC005837.3-201ENST00000612163 286 ntBASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COLCA1Q6ZS62 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLCA1Q6ZS62 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLCA1Q6ZS62 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms