Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 AC092028.1-203ENST00000608262 953 ntBASIC18.62■□□□□ 0.57
C11orf88Q6PI97 ALDH1A3-203ENST00000557963 1670 ntBASIC18.62■□□□□ 0.57
C11orf88Q6PI97 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf88Q6PI97 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 UNC93B8-201ENST00000511903 705 ntBASIC18.61■□□□□ 0.57
C11orf88Q6PI97 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 AC092667.1-201ENST00000434301 2586 ntBASIC18.61■□□□□ 0.57
C11orf88Q6PI97 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.61■□□□□ 0.57
C11orf88Q6PI97 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C11orf88Q6PI97 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 AC019069.1-201ENST00000610008 1333 ntBASIC18.59■□□□□ 0.57
C11orf88Q6PI97 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C11orf88Q6PI97 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C11orf88Q6PI97 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C11orf88Q6PI97 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms