Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 TERF1P5-201ENST00000477545 1207 ntBASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 SLC7A5P1-201ENST00000568957 537 ntBASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 AP004607.7-201ENST00000527152 1677 ntBASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
CNKSR3Q6P9H4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 POU5F1P3-201ENST00000428824 1078 ntBASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CNKSR3Q6P9H4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.34
CNKSR3Q6P9H4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CNKSR3Q6P9H4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.39■■□□□ 1.34
CNKSR3Q6P9H4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 CYP2T1P-201ENST00000432607 1285 ntBASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 AC008687.6-201ENST00000596318 630 ntBASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 AC068338.2-201ENST00000563278 1430 ntBASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CNKSR3Q6P9H4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 MIPEPP3-201ENST00000412105 444 ntBASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 AC093827.2-201ENST00000512654 315 ntBASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 ITM2C-210ENST00000620962 501 ntBASIC23.38■■□□□ 1.33
CNKSR3Q6P9H4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 AC007322.4-201ENST00000509611 723 ntBASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 MKRN4P-201ENST00000444706 1521 ntBASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CNKSR3Q6P9H4 LINC01960-201ENST00000563759 1884 ntBASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 RNA5SP413-201ENST00000516373 109 ntBASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 EEF1DP3-203ENST00000566025 782 ntBASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 AL034346.1-201ENST00000568244 1277 ntBASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.36■■□□□ 1.33
CNKSR3Q6P9H4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 OR10C1-204ENST00000622521 1039 ntBASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms