Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 FAM210CP-201ENST00000445714 574 ntBASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 UBE2SP1-201ENST00000450587 669 ntBASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 AC026366.1-201ENST00000488803 879 ntBASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 AC091874.3-201ENST00000512672 1195 ntBASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 AC073912.3-201ENST00000624414 853 ntBASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 AC079630.1-202ENST00000618127 1840 ntBASIC22.47■■□□□ 1.19
PTCRAQ6ISU1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 AC010331.1-201ENST00000611423 582 ntBASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCRAQ6ISU1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.45■■□□□ 1.19
PTCRAQ6ISU1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 AP003733.4-201ENST00000623785 1697 ntBASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCRAQ6ISU1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 AC145676.1-201ENST00000514988 2004 ntBASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 UNC93B5-201ENST00000530315 699 ntBASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 AP003097.1-201ENST00000530657 1135 ntBASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCRAQ6ISU1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 DUSP8P5-201ENST00000422884 1815 ntBASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 MIR718-201ENST00000390190 70 ntBASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCRAQ6ISU1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.42■■□□□ 1.18
PTCRAQ6ISU1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms