Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 pRNA.5-201ENST00000612139 90 ntBASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 pRNA.11-201ENST00000618423 90 ntBASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 pRNA.13-201ENST00000619112 90 ntBASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCGF3Q3KNV8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 AC080038.3-201ENST00000623346 1952 ntBASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 MIR4767-201ENST00000582827 78 ntBASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCGF3Q3KNV8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.96■□□□□ 0.63
PCGF3Q3KNV8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 AC026310.3-201ENST00000625186 2373 ntBASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.95■□□□□ 0.62
PCGF3Q3KNV8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 AL499627.2-201ENST00000606283 725 ntBASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCGF3Q3KNV8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 SUDS3P1-201ENST00000505831 966 ntBASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PCGF3Q3KNV8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCGF3Q3KNV8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCGF3Q3KNV8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.92■□□□□ 0.62
PCGF3Q3KNV8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms