Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.61■□□□□ 0.73
CXCR4P61073 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
CXCR4P61073 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.61■□□□□ 0.73
CXCR4P61073 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.6■□□□□ 0.73
CXCR4P61073 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CXCR4P61073 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 AC103834.1-201ENST00000520383 144 ntBASIC19.6■□□□□ 0.73
CXCR4P61073 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCR4P61073 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.6■□□□□ 0.73
CXCR4P61073 FEM1AP1-201ENST00000431297 1995 ntBASIC19.6■□□□□ 0.73
CXCR4P61073 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCR4P61073 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CXCR4P61073 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CXCR4P61073 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCR4P61073 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CXCR4P61073 DUX4L4-201ENST00000566884 1269 ntBASIC19.59■□□□□ 0.73
CXCR4P61073 AC012354.3-201ENST00000623734 483 ntBASIC19.59■□□□□ 0.73
CXCR4P61073 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CXCR4P61073 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CXCR4P61073 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.59■□□□□ 0.73
CXCR4P61073 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.59■□□□□ 0.73
CXCR4P61073 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 KRT8P33-201ENST00000508125 1423 ntBASIC19.59■□□□□ 0.73
CXCR4P61073 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.59■□□□□ 0.73
CXCR4P61073 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCR4P61073 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.58■□□□□ 0.73
CXCR4P61073 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CXCR4P61073 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CXCR4P61073 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CXCR4P61073 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
CXCR4P61073 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CXCR4P61073 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CXCR4P61073 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.58■□□□□ 0.73
CXCR4P61073 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CXCR4P61073 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
CXCR4P61073 OXCT2P1-201ENST00000447263 1535 ntBASIC19.58■□□□□ 0.73
CXCR4P61073 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CXCR4P61073 YBX1P4-201ENST00000392794 808 ntBASIC19.58■□□□□ 0.72
CXCR4P61073 AC103724.3-201ENST00000564481 992 ntBASIC19.58■□□□□ 0.72
CXCR4P61073 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
CXCR4P61073 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCR4P61073 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCR4P61073 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCR4P61073 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCR4P61073 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
CXCR4P61073 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.57■□□□□ 0.72
CXCR4P61073 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.57■□□□□ 0.72
CXCR4P61073 AL033527.3-201ENST00000566366 1196 ntBASIC19.57■□□□□ 0.72
CXCR4P61073 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.57■□□□□ 0.72
CXCR4P61073 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCR4P61073 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CXCR4P61073 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.57■□□□□ 0.72
CXCR4P61073 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCR4P61073 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.56■□□□□ 0.72
CXCR4P61073 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.56■□□□□ 0.72
CXCR4P61073 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CXCR4P61073 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.56■□□□□ 0.72
CXCR4P61073 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CXCR4P61073 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.56■□□□□ 0.72
CXCR4P61073 AC137630.3-201ENST00000607245 391 ntBASIC19.56■□□□□ 0.72
CXCR4P61073 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.56■□□□□ 0.72
CXCR4P61073 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CXCR4P61073 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.56■□□□□ 0.72
CXCR4P61073 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CXCR4P61073 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
CXCR4P61073 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CXCR4P61073 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
CXCR4P61073 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.55■□□□□ 0.72
CXCR4P61073 AC007952.6-201ENST00000573168 2673 ntBASIC19.55■□□□□ 0.72
CXCR4P61073 AC003957.1-201ENST00000625108 2673 ntBASIC19.55■□□□□ 0.72
CXCR4P61073 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CXCR4P61073 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCR4P61073 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms