Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC131274.2-201ENST00000580697 1507 ntBASIC14.96□□□□□ -0.02
CKS1BP61024 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.96□□□□□ -0.02
CKS1BP61024 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.96□□□□□ -0.02
CKS1BP61024 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CKS1BP61024 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.95□□□□□ -0.02
CKS1BP61024 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 ECEL1P1-201ENST00000373592 1742 ntBASIC14.95□□□□□ -0.02
CKS1BP61024 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CKS1BP61024 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.95□□□□□ -0.02
CKS1BP61024 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CKS1BP61024 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CKS1BP61024 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.95□□□□□ -0.02
CKS1BP61024 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.95□□□□□ -0.02
CKS1BP61024 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CKS1BP61024 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CKS1BP61024 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CKS1BP61024 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.95□□□□□ -0.02
CKS1BP61024 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS1BP61024 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
CKS1BP61024 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.94□□□□□ -0.02
CKS1BP61024 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.94□□□□□ -0.02
CKS1BP61024 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.94□□□□□ -0.02
CKS1BP61024 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CKS1BP61024 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.94□□□□□ -0.02
CKS1BP61024 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS1BP61024 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CKS1BP61024 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.94□□□□□ -0.02
CKS1BP61024 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.93□□□□□ -0.02
CKS1BP61024 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CKS1BP61024 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CKS1BP61024 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.93□□□□□ -0.02
CKS1BP61024 AC242852.2-201ENST00000615738 1807 ntBASIC14.93□□□□□ -0.02
CKS1BP61024 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS1BP61024 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CKS1BP61024 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CKS1BP61024 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CKS1BP61024 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.92□□□□□ -0.02
CKS1BP61024 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.92□□□□□ -0.02
CKS1BP61024 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CKS1BP61024 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CKS1BP61024 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.91□□□□□ -0.02
CKS1BP61024 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS1BP61024 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms