Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN18P56856 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN18P56856 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 AC055733.4-201ENST00000638462 1354 ntBASIC19.3■□□□□ 0.68
CLDN18P56856 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN18P56856 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLDN18P56856 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN18P56856 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CLDN18P56856 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLDN18P56856 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN18P56856 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN18P56856 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN18P56856 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN18P56856 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.29■□□□□ 0.68
CLDN18P56856 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CLDN18P56856 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN18P56856 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN18P56856 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN18P56856 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLDN18P56856 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 AC127496.7-201ENST00000625110 1798 ntBASIC19.29■□□□□ 0.68
CLDN18P56856 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN18P56856 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN18P56856 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN18P56856 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN18P56856 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN18P56856 IKBKGP1-201ENST00000612193 1073 ntBASIC19.28■□□□□ 0.68
CLDN18P56856 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN18P56856 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLDN18P56856 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN18P56856 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN18P56856 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CLDN18P56856 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN18P56856 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN18P56856 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN18P56856 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN18P56856 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLDN18P56856 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN18P56856 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN18P56856 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN18P56856 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.26■□□□□ 0.67
CLDN18P56856 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN18P56856 AC092437.1-201ENST00000624794 1048 ntBASIC19.26■□□□□ 0.67
CLDN18P56856 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN18P56856 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLDN18P56856 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN18P56856 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
CLDN18P56856 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CLDN18P56856 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CLDN18P56856 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.25■□□□□ 0.67
CLDN18P56856 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN18P56856 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CLDN18P56856 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN18P56856 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN18P56856 AC080038.3-201ENST00000623346 1952 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms