Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH13P55290 AC026471.6-201ENST00000622954 1905 ntBASIC21.06■□□□□ 0.96
CDH13P55290 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDH13P55290 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH13P55290 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH13P55290 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH13P55290 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH13P55290 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH13P55290 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CDH13P55290 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH13P55290 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH13P55290 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH13P55290 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH13P55290 AC005229.4-201ENST00000610085 2198 ntBASIC21.04■□□□□ 0.96
CDH13P55290 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDH13P55290 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDH13P55290 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CDH13P55290 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDH13P55290 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH13P55290 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CDH13P55290 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH13P55290 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH13P55290 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH13P55290 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH13P55290 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CDH13P55290 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH13P55290 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.03■□□□□ 0.96
CDH13P55290 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDH13P55290 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH13P55290 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH13P55290 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH13P55290 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH13P55290 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH13P55290 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH13P55290 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CDH13P55290 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH13P55290 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH13P55290 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CDH13P55290 AL356441.2-201ENST00000443009 864 ntBASIC21.02■□□□□ 0.96
CDH13P55290 AC010525.1-201ENST00000585559 441 ntBASIC21.02■□□□□ 0.96
CDH13P55290 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH13P55290 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH13P55290 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CDH13P55290 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH13P55290 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CDH13P55290 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.01■□□□□ 0.95
CDH13P55290 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH13P55290 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH13P55290 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH13P55290 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.01■□□□□ 0.95
CDH13P55290 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.01■□□□□ 0.95
CDH13P55290 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CDH13P55290 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CDH13P55290 OR7E47P-201ENST00000546390 1422 ntBASIC21.01■□□□□ 0.95
CDH13P55290 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH13P55290 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDH13P55290 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH13P55290 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21■□□□□ 0.95
CDH13P55290 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21■□□□□ 0.95
CDH13P55290 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21■□□□□ 0.95
CDH13P55290 OR2I1P-207ENST00000453522 948 ntBASIC21■□□□□ 0.95
CDH13P55290 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21■□□□□ 0.95
CDH13P55290 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CDH13P55290 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH13P55290 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH13P55290 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH13P55290 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH13P55290 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CDH13P55290 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH13P55290 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDH13P55290 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH13P55290 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH13P55290 Z98882.1-201ENST00000622160 2253 ntBASIC20.98■□□□□ 0.95
CDH13P55290 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH13P55290 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms