Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH12P55289 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH12P55289 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH12P55289 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH12P55289 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.01■□□□□ 0.79
CDH12P55289 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.01■□□□□ 0.79
CDH12P55289 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH12P55289 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CDH12P55289 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH12P55289 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH12P55289 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDH12P55289 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20■□□□□ 0.79
CDH12P55289 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20■□□□□ 0.79
CDH12P55289 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CDH12P55289 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 AC241377.3-202ENST00000626088 1088 ntBASIC20■□□□□ 0.79
CDH12P55289 AC241585.3-202ENST00000628937 1088 ntBASIC20■□□□□ 0.79
CDH12P55289 AC245100.8-202ENST00000629247 1058 ntBASIC20■□□□□ 0.79
CDH12P55289 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDH12P55289 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20■□□□□ 0.79
CDH12P55289 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDH12P55289 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDH12P55289 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20■□□□□ 0.79
CDH12P55289 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH12P55289 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CDH12P55289 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH12P55289 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH12P55289 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDH12P55289 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH12P55289 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDH12P55289 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH12P55289 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH12P55289 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.99■□□□□ 0.79
CDH12P55289 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.99■□□□□ 0.79
CDH12P55289 AL356740.2-201ENST00000601559 647 ntBASIC19.99■□□□□ 0.79
CDH12P55289 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH12P55289 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CDH12P55289 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH12P55289 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH12P55289 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDH12P55289 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH12P55289 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH12P55289 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH12P55289 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH12P55289 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH12P55289 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH12P55289 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 AC006455.2-201ENST00000429931 906 ntBASIC19.97■□□□□ 0.79
CDH12P55289 MIR3621-201ENST00000580529 85 ntBASIC19.97■□□□□ 0.79
CDH12P55289 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.97■□□□□ 0.79
CDH12P55289 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH12P55289 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH12P55289 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDH12P55289 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH12P55289 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH12P55289 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH12P55289 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH12P55289 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH12P55289 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH12P55289 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH12P55289 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH12P55289 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH12P55289 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CDH12P55289 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 Z98882.1-201ENST00000622160 2253 ntBASIC19.95■□□□□ 0.78
CDH12P55289 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH12P55289 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms