Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDH4P55283 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDH4P55283 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.09■■□□□ 1.13
CDH4P55283 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH4P55283 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDH4P55283 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CDH4P55283 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDH4P55283 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.08■■□□□ 1.13
CDH4P55283 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH4P55283 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDH4P55283 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.08■■□□□ 1.13
CDH4P55283 AC233723.2-201ENST00000623798 2106 ntBASIC22.08■■□□□ 1.13
CDH4P55283 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDH4P55283 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDH4P55283 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.08■■□□□ 1.12
CDH4P55283 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
CDH4P55283 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDH4P55283 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDH4P55283 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDH4P55283 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.08■■□□□ 1.12
CDH4P55283 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH4P55283 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.07■■□□□ 1.12
CDH4P55283 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.07■■□□□ 1.12
CDH4P55283 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDH4P55283 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.07■■□□□ 1.12
CDH4P55283 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.07■■□□□ 1.12
CDH4P55283 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDH4P55283 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.07■■□□□ 1.12
CDH4P55283 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.07■■□□□ 1.12
CDH4P55283 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDH4P55283 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CDH4P55283 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.07■■□□□ 1.12
CDH4P55283 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH4P55283 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
CDH4P55283 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.06■■□□□ 1.12
CDH4P55283 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CDH4P55283 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.06■■□□□ 1.12
CDH4P55283 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.06■■□□□ 1.12
CDH4P55283 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.06■■□□□ 1.12
CDH4P55283 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.06■■□□□ 1.12
CDH4P55283 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.06■■□□□ 1.12
CDH4P55283 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH4P55283 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH4P55283 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH4P55283 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.05■■□□□ 1.12
CDH4P55283 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CDH4P55283 AL162430.1-201ENST00000480705 870 ntBASIC22.05■■□□□ 1.12
CDH4P55283 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CDH4P55283 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CDH4P55283 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.04■■□□□ 1.12
CDH4P55283 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.04■■□□□ 1.12
CDH4P55283 AC012676.1-201ENST00000574705 1949 ntBASIC22.04■■□□□ 1.12
CDH4P55283 AC242852.2-201ENST00000615738 1807 ntBASIC22.04■■□□□ 1.12
CDH4P55283 AC092053.2-201ENST00000640557 1818 ntBASIC22.04■■□□□ 1.12
CDH4P55283 AC055733.4-201ENST00000638462 1354 ntBASIC22.04■■□□□ 1.12
CDH4P55283 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CDH4P55283 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.04■■□□□ 1.12
CDH4P55283 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH4P55283 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.04■■□□□ 1.12
CDH4P55283 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CDH4P55283 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDH4P55283 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH4P55283 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDH4P55283 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH4P55283 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDH4P55283 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CDH4P55283 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH4P55283 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH4P55283 GUSBP5-202ENST00000510805 1989 ntBASIC22.03■■□□□ 1.12
CDH4P55283 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.03■■□□□ 1.12
CDH4P55283 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH4P55283 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH4P55283 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH4P55283 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH4P55283 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
CDH4P55283 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH4P55283 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH4P55283 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.03■■□□□ 1.12
CDH4P55283 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.03■■□□□ 1.12
CDH4P55283 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH4P55283 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms