Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.32■□□□□ 0.68
CASP6P55212 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.32■□□□□ 0.68
CASP6P55212 AC083906.2-201ENST00000511578 360 ntBASIC19.32■□□□□ 0.68
CASP6P55212 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 AC005181.1-201ENST00000604782 1256 ntBASIC19.32■□□□□ 0.68
CASP6P55212 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP6P55212 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP6P55212 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP6P55212 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.31■□□□□ 0.68
CASP6P55212 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CASP6P55212 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP6P55212 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CASP6P55212 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP6P55212 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP6P55212 AL139125.2-201ENST00000623134 1869 ntBASIC19.31■□□□□ 0.68
CASP6P55212 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP6P55212 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP6P55212 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.3■□□□□ 0.68
CASP6P55212 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.3■□□□□ 0.68
CASP6P55212 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.3■□□□□ 0.68
CASP6P55212 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CASP6P55212 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.3■□□□□ 0.68
CASP6P55212 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CASP6P55212 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP6P55212 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.29■□□□□ 0.68
CASP6P55212 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CASP6P55212 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.29■□□□□ 0.68
CASP6P55212 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CASP6P55212 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.29■□□□□ 0.68
CASP6P55212 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CASP6P55212 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.29■□□□□ 0.68
CASP6P55212 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 AP001160.3-201ENST00000601484 763 ntBASIC19.29■□□□□ 0.68
CASP6P55212 UBE2DNL-204ENST00000602536 740 ntBASIC19.29■□□□□ 0.68
CASP6P55212 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CASP6P55212 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.29■□□□□ 0.68
CASP6P55212 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CASP6P55212 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASP6P55212 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CASP6P55212 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CASP6P55212 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CASP6P55212 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP6P55212 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP6P55212 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP6P55212 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP6P55212 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP6P55212 AC142086.2-201ENST00000569753 217 ntBASIC19.28■□□□□ 0.68
CASP6P55212 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CASP6P55212 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CASP6P55212 MYCNOS-205ENST00000641950 531 ntBASIC19.28■□□□□ 0.68
CASP6P55212 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP6P55212 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP6P55212 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.28■□□□□ 0.68
CASP6P55212 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASP6P55212 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.28■□□□□ 0.68
CASP6P55212 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASP6P55212 DUSP8P3-201ENST00000399571 1760 ntBASIC19.27■□□□□ 0.68
CASP6P55212 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.27■□□□□ 0.68
CASP6P55212 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASP6P55212 TSPY6P-201ENST00000448518 926 ntBASIC19.27■□□□□ 0.68
CASP6P55212 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.27■□□□□ 0.68
CASP6P55212 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.27■□□□□ 0.68
CASP6P55212 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.27■□□□□ 0.68
CASP6P55212 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.27■□□□□ 0.68
CASP6P55212 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASP6P55212 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CASP6P55212 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASP6P55212 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CASP6P55212 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CASP6P55212 AC020928.2-201ENST00000588717 2197 ntBASIC19.26■□□□□ 0.67
CASP6P55212 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP6P55212 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP6P55212 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP6P55212 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP6P55212 DUX4L16-201ENST00000555130 1264 ntBASIC19.26■□□□□ 0.67
CASP6P55212 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP6P55212 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.26■□□□□ 0.67
CASP6P55212 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms