Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5CP51148 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5CP51148 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5CP51148 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB5CP51148 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5CP51148 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5CP51148 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB5CP51148 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB5CP51148 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB5CP51148 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB5CP51148 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RAB5CP51148 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB5CP51148 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB5CP51148 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB5CP51148 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5CP51148 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAB5CP51148 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAB5CP51148 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB5CP51148 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB5CP51148 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB5CP51148 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 AC060814.1-201ENST00000554326 538 ntBASIC17.28■□□□□ 0.36
RAB5CP51148 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB5CP51148 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB5CP51148 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB5CP51148 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5CP51148 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAB5CP51148 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB5CP51148 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB5CP51148 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB5CP51148 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB5CP51148 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB5CP51148 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB5CP51148 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RAB5CP51148 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB5CP51148 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB5CP51148 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB5CP51148 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB5CP51148 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB5CP51148 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RAB5CP51148 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB5CP51148 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB5CP51148 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB5CP51148 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB5CP51148 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB5CP51148 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB5CP51148 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB5CP51148 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB5CP51148 AC092296.2-201ENST00000589470 999 ntBASIC17.26■□□□□ 0.35
RAB5CP51148 LINC01960-201ENST00000563759 1884 ntBASIC17.26■□□□□ 0.35
RAB5CP51148 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB5CP51148 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAB5CP51148 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB5CP51148 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB5CP51148 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB5CP51148 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB5CP51148 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB5CP51148 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RAB5CP51148 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB5CP51148 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RAB5CP51148 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RAB5CP51148 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB5CP51148 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 ECEL1P2-201ENST00000461596 1295 ntBASIC17.25■□□□□ 0.35
RAB5CP51148 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB5CP51148 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB5CP51148 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RAB5CP51148 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RAB5CP51148 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB5CP51148 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB5CP51148 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB5CP51148 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB5CP51148 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB5CP51148 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB5CP51148 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB5CP51148 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms