Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RXRGP48443 AC004854.2-201ENST00000608450 1441 ntBASIC21.49■■□□□ 1.03
RXRGP48443 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RXRGP48443 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RXRGP48443 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RXRGP48443 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.49■■□□□ 1.03
RXRGP48443 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RXRGP48443 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.49■■□□□ 1.03
RXRGP48443 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.49■■□□□ 1.03
RXRGP48443 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.49■■□□□ 1.03
RXRGP48443 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.49■■□□□ 1.03
RXRGP48443 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.49■■□□□ 1.03
RXRGP48443 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RXRGP48443 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RXRGP48443 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RXRGP48443 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.48■■□□□ 1.03
RXRGP48443 CDCA4P2-201ENST00000441182 718 ntBASIC21.48■■□□□ 1.03
RXRGP48443 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.48■■□□□ 1.03
RXRGP48443 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.48■■□□□ 1.03
RXRGP48443 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.48■■□□□ 1.03
RXRGP48443 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RXRGP48443 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RXRGP48443 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RXRGP48443 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.48■■□□□ 1.03
RXRGP48443 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RXRGP48443 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RXRGP48443 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RXRGP48443 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RXRGP48443 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RXRGP48443 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RXRGP48443 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RXRGP48443 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RXRGP48443 KRT19P1-201ENST00000405746 1186 ntBASIC21.47■■□□□ 1.03
RXRGP48443 HLA-L-209ENST00000420110 1011 ntBASIC21.47■■□□□ 1.03
RXRGP48443 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.47■■□□□ 1.03
RXRGP48443 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.47■■□□□ 1.03
RXRGP48443 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.47■■□□□ 1.03
RXRGP48443 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
RXRGP48443 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.47■■□□□ 1.03
RXRGP48443 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RXRGP48443 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RXRGP48443 AL353803.4-201ENST00000565882 1934 ntBASIC21.47■■□□□ 1.03
RXRGP48443 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRGP48443 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RXRGP48443 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.46■■□□□ 1.03
RXRGP48443 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RXRGP48443 AC073111.5-205ENST00000641717 521 ntBASIC21.46■■□□□ 1.03
RXRGP48443 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.46■■□□□ 1.03
RXRGP48443 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RXRGP48443 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RXRGP48443 OXCT2P1-201ENST00000447263 1535 ntBASIC21.45■■□□□ 1.02
RXRGP48443 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.45■■□□□ 1.02
RXRGP48443 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RXRGP48443 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RXRGP48443 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRGP48443 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.45■■□□□ 1.02
RXRGP48443 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.45■■□□□ 1.02
RXRGP48443 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRGP48443 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.45■■□□□ 1.02
RXRGP48443 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRGP48443 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.45■■□□□ 1.02
RXRGP48443 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RXRGP48443 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RXRGP48443 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.45■■□□□ 1.02
RXRGP48443 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.44■■□□□ 1.02
RXRGP48443 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRGP48443 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRGP48443 BID-214ENST00000617586 542 ntTSL 5 BASIC21.44■■□□□ 1.02
RXRGP48443 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.44■■□□□ 1.02
RXRGP48443 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RXRGP48443 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RXRGP48443 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.44■■□□□ 1.02
RXRGP48443 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RXRGP48443 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RXRGP48443 AC026185.1-201ENST00000445748 174 ntBASIC21.43■■□□□ 1.02
RXRGP48443 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.43■■□□□ 1.02
RXRGP48443 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.43■■□□□ 1.02
RXRGP48443 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.43■■□□□ 1.02
RXRGP48443 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.43■■□□□ 1.02
RXRGP48443 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.43■■□□□ 1.02
RXRGP48443 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RXRGP48443 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RXRGP48443 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.43■■□□□ 1.02
RXRGP48443 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RXRGP48443 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRGP48443 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.42■■□□□ 1.02
RXRGP48443 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRGP48443 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRGP48443 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
RXRGP48443 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RXRGP48443 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.42■■□□□ 1.02
RXRGP48443 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.42■■□□□ 1.02
RXRGP48443 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms