Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKN1AP38936 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.39■□□□□ 0.53
CDKN1AP38936 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDKN1AP38936 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CDKN1AP38936 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKN1AP38936 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.39■□□□□ 0.53
CDKN1AP38936 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKN1AP38936 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDKN1AP38936 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN1AP38936 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDKN1AP38936 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
CDKN1AP38936 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKN1AP38936 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN1AP38936 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN1AP38936 MIR663A-201ENST00000385250 93 ntBASIC18.38■□□□□ 0.53
CDKN1AP38936 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDKN1AP38936 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDKN1AP38936 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN1AP38936 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDKN1AP38936 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
CDKN1AP38936 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN1AP38936 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDKN1AP38936 AL355802.2-201ENST00000402069 882 ntBASIC18.37■□□□□ 0.53
CDKN1AP38936 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKN1AP38936 AL109923.1-201ENST00000618799 583 ntBASIC18.37■□□□□ 0.53
CDKN1AP38936 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN1AP38936 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN1AP38936 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDKN1AP38936 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDKN1AP38936 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN1AP38936 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKN1AP38936 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKN1AP38936 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN1AP38936 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKN1AP38936 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN1AP38936 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKN1AP38936 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN1AP38936 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN1AP38936 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDKN1AP38936 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN1AP38936 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN1AP38936 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN1AP38936 AC009237.3-201ENST00000393279 1427 ntBASIC18.36■□□□□ 0.53
CDKN1AP38936 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKN1AP38936 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN1AP38936 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKN1AP38936 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.36■□□□□ 0.53
CDKN1AP38936 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKN1AP38936 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN1AP38936 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN1AP38936 KRT87P-202ENST00000534226 1464 ntBASIC18.36■□□□□ 0.53
CDKN1AP38936 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.36■□□□□ 0.53
CDKN1AP38936 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKN1AP38936 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CDKN1AP38936 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKN1AP38936 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKN1AP38936 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN1AP38936 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKN1AP38936 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDKN1AP38936 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN1AP38936 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN1AP38936 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN1AP38936 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKN1AP38936 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKN1AP38936 AC068473.5-201ENST00000616428 2072 ntBASIC18.34■□□□□ 0.53
CDKN1AP38936 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN1AP38936 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CDKN1AP38936 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN1AP38936 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKN1AP38936 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKN1AP38936 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKN1AP38936 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.34■□□□□ 0.53
CDKN1AP38936 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN1AP38936 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKN1AP38936 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN1AP38936 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKN1AP38936 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKN1AP38936 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKN1AP38936 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CDKN1AP38936 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKN1AP38936 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKN1AP38936 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.33■□□□□ 0.53
CDKN1AP38936 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN1AP38936 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN1AP38936 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN1AP38936 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKN1AP38936 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKN1AP38936 MFSD11-216ENST00000590393 1141 ntBASIC18.33■□□□□ 0.52
CDKN1AP38936 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN1AP38936 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN1AP38936 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN1AP38936 LINC01960-201ENST00000563759 1884 ntBASIC18.33■□□□□ 0.52
CDKN1AP38936 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms