Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2IP36954 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2IP36954 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2IP36954 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2IP36954 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.81■□□□□ 0.76
POLR2IP36954 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2IP36954 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2IP36954 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2IP36954 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2IP36954 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2IP36954 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2IP36954 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2IP36954 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2IP36954 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2IP36954 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
POLR2IP36954 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2IP36954 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
POLR2IP36954 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2IP36954 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2IP36954 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
POLR2IP36954 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2IP36954 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2IP36954 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2IP36954 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2IP36954 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
POLR2IP36954 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2IP36954 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
POLR2IP36954 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2IP36954 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2IP36954 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2IP36954 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2IP36954 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2IP36954 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2IP36954 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2IP36954 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2IP36954 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2IP36954 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
POLR2IP36954 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2IP36954 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.78■□□□□ 0.76
POLR2IP36954 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
POLR2IP36954 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR2IP36954 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.78■□□□□ 0.76
POLR2IP36954 AC010980.1-201ENST00000587192 1142 ntBASIC19.78■□□□□ 0.76
POLR2IP36954 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2IP36954 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2IP36954 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2IP36954 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2IP36954 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
POLR2IP36954 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
POLR2IP36954 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2IP36954 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2IP36954 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2IP36954 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
POLR2IP36954 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.77■□□□□ 0.76
POLR2IP36954 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR2IP36954 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.77■□□□□ 0.76
POLR2IP36954 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2IP36954 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.77■□□□□ 0.76
POLR2IP36954 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR2IP36954 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2IP36954 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2IP36954 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2IP36954 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2IP36954 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR2IP36954 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR2IP36954 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
POLR2IP36954 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
POLR2IP36954 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.76■□□□□ 0.75
POLR2IP36954 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
POLR2IP36954 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
POLR2IP36954 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR2IP36954 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2IP36954 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
POLR2IP36954 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2IP36954 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2IP36954 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2IP36954 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2IP36954 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms