Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.81■□□□□ 0.12
CKS2P33552 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.81■□□□□ 0.12
CKS2P33552 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.81■□□□□ 0.12
CKS2P33552 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CKS2P33552 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.81■□□□□ 0.12
CKS2P33552 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CKS2P33552 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CKS2P33552 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 AF106564.1-201ENST00000607058 2553 ntBASIC15.81■□□□□ 0.12
CKS2P33552 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CKS2P33552 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CKS2P33552 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CKS2P33552 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.8■□□□□ 0.12
CKS2P33552 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.8■□□□□ 0.12
CKS2P33552 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 MIR6765-201ENST00000614092 87 ntBASIC15.8■□□□□ 0.12
CKS2P33552 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 FEM1AP4-201ENST00000443167 1987 ntBASIC15.8■□□□□ 0.12
CKS2P33552 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CKS2P33552 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CKS2P33552 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
CKS2P33552 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CKS2P33552 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CKS2P33552 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.79■□□□□ 0.12
CKS2P33552 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CKS2P33552 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.79■□□□□ 0.12
CKS2P33552 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 LONRF2P2-201ENST00000439212 571 ntBASIC15.79■□□□□ 0.12
CKS2P33552 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CKS2P33552 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.79■□□□□ 0.12
CKS2P33552 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CKS2P33552 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CKS2P33552 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKS2P33552 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.79■□□□□ 0.12
CKS2P33552 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.78■□□□□ 0.12
CKS2P33552 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKS2P33552 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.78■□□□□ 0.12
CKS2P33552 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKS2P33552 HCG11-201ENST00000411553 5696 ntBASIC15.78■□□□□ 0.12
CKS2P33552 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKS2P33552 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CKS2P33552 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.77■□□□□ 0.12
CKS2P33552 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.77■□□□□ 0.12
CKS2P33552 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CKS2P33552 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CKS2P33552 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS2P33552 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
CKS2P33552 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.77■□□□□ 0.12
CKS2P33552 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS2P33552 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.77■□□□□ 0.12
CKS2P33552 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.77■□□□□ 0.12
CKS2P33552 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS2P33552 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS2P33552 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CKS2P33552 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKS2P33552 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CKS2P33552 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CKS2P33552 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
CKS2P33552 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CKS2P33552 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CKS2P33552 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 SPCS2P3-201ENST00000500401 656 ntBASIC15.76■□□□□ 0.11
CKS2P33552 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
CKS2P33552 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms