Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.37■■□□□ 1.49
CIITAP33076 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.37■■□□□ 1.49
CIITAP33076 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CIITAP33076 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CIITAP33076 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.37■■□□□ 1.49
CIITAP33076 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.37■■□□□ 1.49
CIITAP33076 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CIITAP33076 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.37■■□□□ 1.49
CIITAP33076 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CIITAP33076 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CIITAP33076 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CIITAP33076 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CIITAP33076 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.37■■□□□ 1.49
CIITAP33076 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.37■■□□□ 1.49
CIITAP33076 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CIITAP33076 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CIITAP33076 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.37■■□□□ 1.49
CIITAP33076 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CIITAP33076 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CIITAP33076 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.36■■□□□ 1.49
CIITAP33076 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.36■■□□□ 1.49
CIITAP33076 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.36■■□□□ 1.49
CIITAP33076 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.36■■□□□ 1.49
CIITAP33076 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CIITAP33076 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 AC242852.2-201ENST00000615738 1807 ntBASIC24.35■■□□□ 1.49
CIITAP33076 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.35■■□□□ 1.49
CIITAP33076 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.35■■□□□ 1.49
CIITAP33076 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.35■■□□□ 1.49
CIITAP33076 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CIITAP33076 AL162430.1-201ENST00000480705 870 ntBASIC24.35■■□□□ 1.49
CIITAP33076 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.35■■□□□ 1.49
CIITAP33076 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.35■■□□□ 1.49
CIITAP33076 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CIITAP33076 AC092053.2-201ENST00000640557 1818 ntBASIC24.35■■□□□ 1.49
CIITAP33076 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.34■■□□□ 1.49
CIITAP33076 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CIITAP33076 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CIITAP33076 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.34■■□□□ 1.49
CIITAP33076 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CIITAP33076 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.34■■□□□ 1.49
CIITAP33076 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CIITAP33076 GUSBP5-202ENST00000510805 1989 ntBASIC24.34■■□□□ 1.49
CIITAP33076 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.34■■□□□ 1.49
CIITAP33076 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CIITAP33076 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.34■■□□□ 1.49
CIITAP33076 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CIITAP33076 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CIITAP33076 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CIITAP33076 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.33■■□□□ 1.49
CIITAP33076 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.33■■□□□ 1.49
CIITAP33076 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CIITAP33076 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
CIITAP33076 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CIITAP33076 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.33■■□□□ 1.49
CIITAP33076 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.33■■□□□ 1.49
CIITAP33076 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.33■■□□□ 1.49
CIITAP33076 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CIITAP33076 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CIITAP33076 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
CIITAP33076 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.32■■□□□ 1.48
CIITAP33076 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CIITAP33076 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.32■■□□□ 1.48
CIITAP33076 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.32■■□□□ 1.48
CIITAP33076 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.32■■□□□ 1.48
CIITAP33076 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CIITAP33076 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CIITAP33076 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.32■■□□□ 1.48
CIITAP33076 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CIITAP33076 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.32■■□□□ 1.48
CIITAP33076 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CIITAP33076 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.32■■□□□ 1.48
CIITAP33076 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CIITAP33076 AP006587.3-201ENST00000525742 1516 ntBASIC24.31■■□□□ 1.48
CIITAP33076 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.31■■□□□ 1.48
CIITAP33076 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CIITAP33076 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CIITAP33076 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CIITAP33076 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CIITAP33076 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CIITAP33076 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.31■■□□□ 1.48
CIITAP33076 KRT18P5-201ENST00000436075 1291 ntBASIC24.31■■□□□ 1.48
CIITAP33076 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CIITAP33076 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms