Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ACKR3P25106 AL136116.3-201ENST00000402907 1138 ntBASIC18.68■□□□□ 0.58
ACKR3P25106 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ACKR3P25106 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.68■□□□□ 0.58
ACKR3P25106 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.68■□□□□ 0.58
ACKR3P25106 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACKR3P25106 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACKR3P25106 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACKR3P25106 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACKR3P25106 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACKR3P25106 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACKR3P25106 AC010542.4-201ENST00000563151 1910 ntBASIC18.67■□□□□ 0.58
ACKR3P25106 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.67■□□□□ 0.58
ACKR3P25106 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACKR3P25106 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.67■□□□□ 0.58
ACKR3P25106 AC079089.2-201ENST00000531211 1277 ntBASIC18.67■□□□□ 0.58
ACKR3P25106 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
ACKR3P25106 AC136469.2-201ENST00000623944 1028 ntBASIC18.67■□□□□ 0.58
ACKR3P25106 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACKR3P25106 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.67■□□□□ 0.58
ACKR3P25106 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACKR3P25106 AC007375.3-201ENST00000600936 2314 ntBASIC18.67■□□□□ 0.58
ACKR3P25106 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACKR3P25106 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.66■□□□□ 0.58
ACKR3P25106 AC131212.1-201ENST00000613771 668 ntBASIC18.66■□□□□ 0.58
ACKR3P25106 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.66■□□□□ 0.58
ACKR3P25106 AC011298.3-201ENST00000615796 283 ntBASIC18.66■□□□□ 0.58
ACKR3P25106 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.66■□□□□ 0.58
ACKR3P25106 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ACKR3P25106 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACKR3P25106 FAM99A-202ENST00000538190 1989 ntBASIC18.66■□□□□ 0.58
ACKR3P25106 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ACKR3P25106 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
ACKR3P25106 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ACKR3P25106 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.65■□□□□ 0.58
ACKR3P25106 AC068587.7-201ENST00000641602 218 ntBASIC18.65■□□□□ 0.58
ACKR3P25106 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ACKR3P25106 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.65■□□□□ 0.58
ACKR3P25106 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.65■□□□□ 0.58
ACKR3P25106 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.65■□□□□ 0.58
ACKR3P25106 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.65■□□□□ 0.58
ACKR3P25106 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.65■□□□□ 0.58
ACKR3P25106 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACKR3P25106 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ACKR3P25106 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACKR3P25106 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.64■□□□□ 0.57
ACKR3P25106 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACKR3P25106 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACKR3P25106 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ACKR3P25106 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ACKR3P25106 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACKR3P25106 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACKR3P25106 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACKR3P25106 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ACKR3P25106 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.64■□□□□ 0.57
ACKR3P25106 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.63■□□□□ 0.57
ACKR3P25106 SLC47A1P1-202ENST00000449666 945 ntBASIC18.63■□□□□ 0.57
ACKR3P25106 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.63■□□□□ 0.57
ACKR3P25106 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.63■□□□□ 0.57
ACKR3P25106 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.63■□□□□ 0.57
ACKR3P25106 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.63■□□□□ 0.57
ACKR3P25106 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ACKR3P25106 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.63■□□□□ 0.57
ACKR3P25106 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACKR3P25106 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.63■□□□□ 0.57
ACKR3P25106 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
ACKR3P25106 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ACKR3P25106 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms