Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 pRNA.6-201ENST00000610482 90 ntBASIC19.99■□□□□ 0.79
TNFRSF1BP20333 pRNA.5-201ENST00000612139 90 ntBASIC19.99■□□□□ 0.79
TNFRSF1BP20333 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 pRNA.11-201ENST00000618423 90 ntBASIC19.99■□□□□ 0.79
TNFRSF1BP20333 pRNA.13-201ENST00000619112 90 ntBASIC19.99■□□□□ 0.79
TNFRSF1BP20333 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 AL031602.1-201ENST00000633169 911 ntBASIC19.98■□□□□ 0.79
TNFRSF1BP20333 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1BP20333 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFRSF1BP20333 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1BP20333 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 KRT16P3-201ENST00000439127 1283 ntBASIC19.95■□□□□ 0.78
TNFRSF1BP20333 AC079089.2-201ENST00000531211 1277 ntBASIC19.95■□□□□ 0.78
TNFRSF1BP20333 AC099791.2-201ENST00000605725 427 ntBASIC19.95■□□□□ 0.78
TNFRSF1BP20333 AC241377.3-202ENST00000626088 1088 ntBASIC19.95■□□□□ 0.78
TNFRSF1BP20333 AC241585.3-202ENST00000628937 1088 ntBASIC19.95■□□□□ 0.78
TNFRSF1BP20333 AC245100.8-202ENST00000629247 1058 ntBASIC19.95■□□□□ 0.78
TNFRSF1BP20333 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1BP20333 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TNFRSF1BP20333 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFRSF1BP20333 FEM1AP4-201ENST00000443167 1987 ntBASIC19.94■□□□□ 0.78
TNFRSF1BP20333 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFRSF1BP20333 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFRSF1BP20333 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFRSF1BP20333 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TNFRSF1BP20333 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFRSF1BP20333 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms