Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CHGAP10645 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHGAP10645 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC31.19■■■□□ 2.58
CHGAP10645 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC31.19■■■□□ 2.58
CHGAP10645 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHGAP10645 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.19■■■□□ 2.58
CHGAP10645 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHGAP10645 AP004607.7-201ENST00000527152 1677 ntBASIC31.19■■■□□ 2.58
CHGAP10645 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHGAP10645 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHGAP10645 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
CHGAP10645 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHGAP10645 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHGAP10645 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHGAP10645 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHGAP10645 LINC01960-201ENST00000563759 1884 ntBASIC31.17■■■□□ 2.58
CHGAP10645 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHGAP10645 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC31.17■■■□□ 2.58
CHGAP10645 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHGAP10645 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.17■■■□□ 2.58
CHGAP10645 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC31.17■■■□□ 2.58
CHGAP10645 AC010536.3-201ENST00000620306 533 ntBASIC31.17■■■□□ 2.58
CHGAP10645 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHGAP10645 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.17■■■□□ 2.58
CHGAP10645 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
CHGAP10645 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHGAP10645 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHGAP10645 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CHGAP10645 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC31.16■■■□□ 2.58
CHGAP10645 AC069152.1-201ENST00000438030 544 ntBASIC31.16■■■□□ 2.58
CHGAP10645 AC010141.2-201ENST00000452426 721 ntBASIC31.16■■■□□ 2.58
CHGAP10645 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CHGAP10645 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHGAP10645 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHGAP10645 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHGAP10645 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.15■■■□□ 2.58
CHGAP10645 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHGAP10645 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CHGAP10645 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.15■■■□□ 2.58
CHGAP10645 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHGAP10645 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHGAP10645 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC31.15■■■□□ 2.58
CHGAP10645 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.15■■■□□ 2.58
CHGAP10645 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHGAP10645 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHGAP10645 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC31.15■■■□□ 2.58
CHGAP10645 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.14■■■□□ 2.58
CHGAP10645 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.14■■■□□ 2.58
CHGAP10645 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.14■■■□□ 2.58
CHGAP10645 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHGAP10645 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.14■■■□□ 2.58
CHGAP10645 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
CHGAP10645 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHGAP10645 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC31.14■■■□□ 2.58
CHGAP10645 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC31.14■■■□□ 2.58
CHGAP10645 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CHGAP10645 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC31.13■■■□□ 2.57
CHGAP10645 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHGAP10645 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CHGAP10645 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHGAP10645 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.13■■■□□ 2.57
CHGAP10645 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.13■■■□□ 2.57
CHGAP10645 AC138907.5-202ENST00000569484 235 ntBASIC31.13■■■□□ 2.57
CHGAP10645 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CHGAP10645 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CHGAP10645 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHGAP10645 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC31.12■■■□□ 2.57
CHGAP10645 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHGAP10645 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHGAP10645 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.12■■■□□ 2.57
CHGAP10645 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.12■■■□□ 2.57
CHGAP10645 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHGAP10645 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHGAP10645 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHGAP10645 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHGAP10645 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.11■■■□□ 2.57
CHGAP10645 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHGAP10645 AC133041.1-202ENST00000642053 222 ntBASIC31.11■■■□□ 2.57
CHGAP10645 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CHGAP10645 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHGAP10645 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC31.1■■■□□ 2.57
CHGAP10645 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC31.1■■■□□ 2.57
CHGAP10645 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHGAP10645 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.1■■■□□ 2.57
CHGAP10645 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHGAP10645 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC31.1■■■□□ 2.57
CHGAP10645 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHGAP10645 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHGAP10645 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC31.09■■■□□ 2.57
CHGAP10645 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC31.09■■■□□ 2.57
CHGAP10645 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHGAP10645 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHGAP10645 FAM201B-201ENST00000458407 597 ntBASIC31.09■■■□□ 2.57
CHGAP10645 AC133552.2-202ENST00000575694 574 ntBASIC31.09■■■□□ 2.57
CHGAP10645 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHGAP10645 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.09■■■□□ 2.57
CHGAP10645 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
CHGAP10645 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHGAP10645 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHGAP10645 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms