Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.09■□□□□ 0.81
PDGFAP04085 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFAP04085 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.09■□□□□ 0.81
PDGFAP04085 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFAP04085 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
PDGFAP04085 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFAP04085 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFAP04085 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PDGFAP04085 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFAP04085 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFAP04085 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFAP04085 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PDGFAP04085 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFAP04085 AC010141.3-201ENST00000456659 717 ntBASIC20.08■□□□□ 0.81
PDGFAP04085 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.08■□□□□ 0.81
PDGFAP04085 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.08■□□□□ 0.81
PDGFAP04085 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PDGFAP04085 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PDGFAP04085 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.07■□□□□ 0.8
PDGFAP04085 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFAP04085 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PDGFAP04085 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFAP04085 GPX1P1-201ENST00000388829 606 ntBASIC20.07■□□□□ 0.8
PDGFAP04085 AC079140.4-201ENST00000507448 529 ntBASIC20.07■□□□□ 0.8
PDGFAP04085 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.07■□□□□ 0.8
PDGFAP04085 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 AC068587.7-201ENST00000641602 218 ntBASIC20.07■□□□□ 0.8
PDGFAP04085 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PDGFAP04085 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFAP04085 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFAP04085 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFAP04085 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFAP04085 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFAP04085 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFAP04085 KRT18P11-201ENST00000435214 1283 ntBASIC20.06■□□□□ 0.8
PDGFAP04085 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFAP04085 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFAP04085 MFSD11-216ENST00000590393 1141 ntBASIC20.06■□□□□ 0.8
PDGFAP04085 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.06■□□□□ 0.8
PDGFAP04085 AL050303.2-201ENST00000619798 666 ntBASIC20.06■□□□□ 0.8
PDGFAP04085 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.06■□□□□ 0.8
PDGFAP04085 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFAP04085 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFAP04085 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDGFAP04085 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFAP04085 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.05■□□□□ 0.8
PDGFAP04085 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFAP04085 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.05■□□□□ 0.8
PDGFAP04085 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDGFAP04085 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFAP04085 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.05■□□□□ 0.8
PDGFAP04085 TMEM191A-211ENST00000637163 1067 ntBASIC20.05■□□□□ 0.8
PDGFAP04085 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDGFAP04085 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
PDGFAP04085 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFAP04085 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFAP04085 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.05■□□□□ 0.8
PDGFAP04085 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFAP04085 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.04■□□□□ 0.8
PDGFAP04085 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFAP04085 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.04■□□□□ 0.8
PDGFAP04085 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFAP04085 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFAP04085 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFAP04085 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PDGFAP04085 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFAP04085 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFAP04085 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.04■□□□□ 0.8
PDGFAP04085 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFAP04085 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFAP04085 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFAP04085 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDGFAP04085 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.03■□□□□ 0.8
PDGFAP04085 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFAP04085 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.03■□□□□ 0.8
PDGFAP04085 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFAP04085 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.03■□□□□ 0.8
PDGFAP04085 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFAP04085 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PDGFAP04085 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDGFAP04085 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFAP04085 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDGFAP04085 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFAP04085 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDGFAP04085 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PDGFAP04085 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.02■□□□□ 0.8
PDGFAP04085 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.02■□□□□ 0.8
PDGFAP04085 CD99P1-205ENST00000527459 561 ntBASIC20.02■□□□□ 0.8
PDGFAP04085 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFAP04085 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.02■□□□□ 0.8
PDGFAP04085 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.02■□□□□ 0.8
PDGFAP04085 AC087239.1-201ENST00000622671 572 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms