Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MT-CO1P00395 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
MT-CO1P00395 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
MT-CO1P00395 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
MT-CO1P00395 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MT-CO1P00395 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.04■■□□□ 1.12
MT-CO1P00395 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.04■■□□□ 1.12
MT-CO1P00395 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
MT-CO1P00395 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
MT-CO1P00395 AC233723.2-201ENST00000623798 2106 ntBASIC22.04■■□□□ 1.12
MT-CO1P00395 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
MT-CO1P00395 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.03■■□□□ 1.12
MT-CO1P00395 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.03■■□□□ 1.12
MT-CO1P00395 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
MT-CO1P00395 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
MT-CO1P00395 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.03■■□□□ 1.12
MT-CO1P00395 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-CO1P00395 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MT-CO1P00395 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.02■■□□□ 1.12
MT-CO1P00395 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MT-CO1P00395 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
MT-CO1P00395 KRT18P14-201ENST00000534205 1250 ntBASIC22.02■■□□□ 1.12
MT-CO1P00395 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MT-CO1P00395 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
MT-CO1P00395 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
MT-CO1P00395 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.02■■□□□ 1.11
MT-CO1P00395 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MT-CO1P00395 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MT-CO1P00395 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MT-CO1P00395 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.01■■□□□ 1.11
MT-CO1P00395 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
MT-CO1P00395 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MT-CO1P00395 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.01■■□□□ 1.11
MT-CO1P00395 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
MT-CO1P00395 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.01■■□□□ 1.11
MT-CO1P00395 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.01■■□□□ 1.11
MT-CO1P00395 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.01■■□□□ 1.11
MT-CO1P00395 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MT-CO1P00395 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 EP400NL-214ENST00000641289 2402 ntBASIC22■■□□□ 1.11
MT-CO1P00395 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22■■□□□ 1.11
MT-CO1P00395 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22■■□□□ 1.11
MT-CO1P00395 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
MT-CO1P00395 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22■■□□□ 1.11
MT-CO1P00395 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
MT-CO1P00395 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
MT-CO1P00395 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22■■□□□ 1.11
MT-CO1P00395 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 AL117328.2-201ENST00000624617 1940 ntBASIC22■■□□□ 1.11
MT-CO1P00395 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MT-CO1P00395 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
MT-CO1P00395 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
MT-CO1P00395 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.99■■□□□ 1.11
MT-CO1P00395 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.99■■□□□ 1.11
MT-CO1P00395 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.99■■□□□ 1.11
MT-CO1P00395 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.99■■□□□ 1.11
MT-CO1P00395 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-CO1P00395 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.99■■□□□ 1.11
MT-CO1P00395 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.99■■□□□ 1.11
MT-CO1P00395 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
MT-CO1P00395 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
MT-CO1P00395 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.98■■□□□ 1.11
MT-CO1P00395 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.98■■□□□ 1.11
MT-CO1P00395 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 KRT18P5-201ENST00000436075 1291 ntBASIC21.98■■□□□ 1.11
MT-CO1P00395 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 AC092666.2-201ENST00000613287 246 ntBASIC21.98■■□□□ 1.11
MT-CO1P00395 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.98■■□□□ 1.11
MT-CO1P00395 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MT-CO1P00395 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
MT-CO1P00395 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MT-CO1P00395 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
MT-CO1P00395 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms