Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.54■□□□□ 0.4
SCAF4O95104 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SCAF4O95104 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 AC239859.2-201ENST00000444165 318 ntBASIC17.54■□□□□ 0.4
SCAF4O95104 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.54■□□□□ 0.4
SCAF4O95104 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.54■□□□□ 0.4
SCAF4O95104 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAF4O95104 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SCAF4O95104 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCAF4O95104 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAF4O95104 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCAF4O95104 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SCAF4O95104 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAF4O95104 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAF4O95104 KRT125P-201ENST00000546827 989 ntBASIC17.53■□□□□ 0.4
SCAF4O95104 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCAF4O95104 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAF4O95104 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCAF4O95104 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.53■□□□□ 0.4
SCAF4O95104 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.53■□□□□ 0.4
SCAF4O95104 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCAF4O95104 AC005229.4-201ENST00000610085 2198 ntBASIC17.53■□□□□ 0.4
SCAF4O95104 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SCAF4O95104 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SCAF4O95104 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCAF4O95104 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SCAF4O95104 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCAF4O95104 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCAF4O95104 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SCAF4O95104 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SCAF4O95104 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SCAF4O95104 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SCAF4O95104 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SCAF4O95104 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SCAF4O95104 FAM99A-202ENST00000538190 1989 ntBASIC17.52■□□□□ 0.4
SCAF4O95104 AC009086.3-201ENST00000623486 1008 ntBASIC17.52■□□□□ 0.4
SCAF4O95104 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAF4O95104 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAF4O95104 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCAF4O95104 FP325331.1-202ENST00000623531 1380 ntBASIC17.52■□□□□ 0.39
SCAF4O95104 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SCAF4O95104 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SCAF4O95104 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SCAF4O95104 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SCAF4O95104 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.51■□□□□ 0.39
SCAF4O95104 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAF4O95104 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.51■□□□□ 0.39
SCAF4O95104 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SCAF4O95104 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCAF4O95104 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAF4O95104 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAF4O95104 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SCAF4O95104 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.51■□□□□ 0.39
SCAF4O95104 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SCAF4O95104 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCAF4O95104 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.51■□□□□ 0.39
SCAF4O95104 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SCAF4O95104 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCAF4O95104 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCAF4O95104 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.5■□□□□ 0.39
SCAF4O95104 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.5■□□□□ 0.39
SCAF4O95104 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.5■□□□□ 0.39
SCAF4O95104 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.5■□□□□ 0.39
SCAF4O95104 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCAF4O95104 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCAF4O95104 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SCAF4O95104 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCAF4O95104 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
SCAF4O95104 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SCAF4O95104 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCAF4O95104 AC244015.2-201ENST00000616358 1861 ntBASIC17.5■□□□□ 0.39
SCAF4O95104 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCAF4O95104 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCAF4O95104 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SCAF4O95104 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SCAF4O95104 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.49■□□□□ 0.39
SCAF4O95104 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SCAF4O95104 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.49■□□□□ 0.39
SCAF4O95104 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.49■□□□□ 0.39
SCAF4O95104 AC137630.3-201ENST00000607245 391 ntBASIC17.49■□□□□ 0.39
SCAF4O95104 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.49■□□□□ 0.39
SCAF4O95104 LINC01529-204ENST00000636474 1715 ntBASIC17.49■□□□□ 0.39
SCAF4O95104 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms