Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SNCGO76070 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCGO76070 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCGO76070 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCGO76070 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCGO76070 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCGO76070 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNCGO76070 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCGO76070 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.54□□□□□ -0.08
SNCGO76070 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 AC097358.2-201ENST00000607541 1159 ntBASIC14.54□□□□□ -0.08
SNCGO76070 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 ESRRAP2-201ENST00000418437 1549 ntBASIC14.54□□□□□ -0.08
SNCGO76070 HNRNPLP2-201ENST00000568980 1570 ntBASIC14.54□□□□□ -0.08
SNCGO76070 AC092068.2-201ENST00000590491 1708 ntBASIC14.54□□□□□ -0.08
SNCGO76070 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 AC242852.2-201ENST00000615738 1807 ntBASIC14.54□□□□□ -0.08
SNCGO76070 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SNCGO76070 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SNCGO76070 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNCGO76070 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNCGO76070 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SNCGO76070 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCGO76070 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCGO76070 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SNCGO76070 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 AC026471.1-201ENST00000564629 3026 ntBASIC14.53□□□□□ -0.08
SNCGO76070 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNCGO76070 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.53□□□□□ -0.08
SNCGO76070 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCGO76070 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCGO76070 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SNCGO76070 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
SNCGO76070 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNCGO76070 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.52□□□□□ -0.08
SNCGO76070 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SNCGO76070 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCGO76070 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNCGO76070 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC14.52□□□□□ -0.09
SNCGO76070 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SNCGO76070 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCGO76070 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNCGO76070 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SNCGO76070 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.52□□□□□ -0.09
SNCGO76070 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.52□□□□□ -0.09
SNCGO76070 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC14.51□□□□□ -0.09
SNCGO76070 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SNCGO76070 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SNCGO76070 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.51□□□□□ -0.09
SNCGO76070 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.51□□□□□ -0.09
SNCGO76070 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 AC126177.7-201ENST00000547904 679 ntBASIC14.51□□□□□ -0.09
SNCGO76070 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SNCGO76070 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 AC120498.9-201ENST00000339021 3867 ntBASIC14.51□□□□□ -0.09
SNCGO76070 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNCGO76070 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNCGO76070 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SNCGO76070 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.5□□□□□ -0.09
SNCGO76070 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCGO76070 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.5□□□□□ -0.09
SNCGO76070 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNCGO76070 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SNCGO76070 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNCGO76070 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SNCGO76070 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNCGO76070 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms