Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.05■□□□□ 0.96
LRP4O75096 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.05■□□□□ 0.96
LRP4O75096 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRP4O75096 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LRP4O75096 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRP4O75096 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRP4O75096 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRP4O75096 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRP4O75096 AC138907.5-202ENST00000569484 235 ntBASIC21.05■□□□□ 0.96
LRP4O75096 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRP4O75096 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.05■□□□□ 0.96
LRP4O75096 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.05■□□□□ 0.96
LRP4O75096 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRP4O75096 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRP4O75096 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.04■□□□□ 0.96
LRP4O75096 EEF1DP3-203ENST00000566025 782 ntBASIC21.04■□□□□ 0.96
LRP4O75096 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRP4O75096 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRP4O75096 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LRP4O75096 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRP4O75096 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRP4O75096 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LRP4O75096 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRP4O75096 AC010141.2-201ENST00000452426 721 ntBASIC21.04■□□□□ 0.96
LRP4O75096 DUX4L16-201ENST00000555130 1264 ntBASIC21.04■□□□□ 0.96
LRP4O75096 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.03■□□□□ 0.96
LRP4O75096 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 ESRRAP2-201ENST00000418437 1549 ntBASIC21.03■□□□□ 0.96
LRP4O75096 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
LRP4O75096 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.03■□□□□ 0.96
LRP4O75096 CNN2P6-201ENST00000439038 900 ntBASIC21.03■□□□□ 0.96
LRP4O75096 AC080038.1-201ENST00000611274 1154 ntBASIC21.03■□□□□ 0.96
LRP4O75096 AL050303.2-201ENST00000619798 666 ntBASIC21.03■□□□□ 0.96
LRP4O75096 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRP4O75096 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRP4O75096 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.02■□□□□ 0.96
LRP4O75096 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRP4O75096 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRP4O75096 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LRP4O75096 CROCCP5-201ENST00000436658 830 ntBASIC21.02■□□□□ 0.96
LRP4O75096 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRP4O75096 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.02■□□□□ 0.96
LRP4O75096 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.02■□□□□ 0.96
LRP4O75096 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.02■□□□□ 0.96
LRP4O75096 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.02■□□□□ 0.96
LRP4O75096 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRP4O75096 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRP4O75096 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRP4O75096 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.02■□□□□ 0.95
LRP4O75096 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
LRP4O75096 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.02■□□□□ 0.95
LRP4O75096 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRP4O75096 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.01■□□□□ 0.95
LRP4O75096 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRP4O75096 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRP4O75096 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRP4O75096 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LRP4O75096 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.01■□□□□ 0.95
LRP4O75096 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRP4O75096 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRP4O75096 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRP4O75096 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LRP4O75096 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21■□□□□ 0.95
LRP4O75096 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21■□□□□ 0.95
LRP4O75096 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21■□□□□ 0.95
LRP4O75096 AC127496.7-201ENST00000625110 1798 ntBASIC21■□□□□ 0.95
LRP4O75096 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LRP4O75096 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LRP4O75096 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21■□□□□ 0.95
LRP4O75096 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LRP4O75096 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRP4O75096 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.99■□□□□ 0.95
LRP4O75096 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LRP4O75096 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRP4O75096 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.99■□□□□ 0.95
LRP4O75096 HLA-L-209ENST00000420110 1011 ntBASIC20.99■□□□□ 0.95
LRP4O75096 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
LRP4O75096 KRT18P20-201ENST00000548986 1279 ntBASIC20.99■□□□□ 0.95
LRP4O75096 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.99■□□□□ 0.95
LRP4O75096 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRP4O75096 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.99■□□□□ 0.95
LRP4O75096 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.99■□□□□ 0.95
LRP4O75096 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.99■□□□□ 0.95
LRP4O75096 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LRP4O75096 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms