Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX2O60749 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.53■■□□□ 1.04
SNX2O60749 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX2O60749 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX2O60749 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNX2O60749 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.53■■□□□ 1.04
SNX2O60749 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX2O60749 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SNX2O60749 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.53■■□□□ 1.04
SNX2O60749 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 AP005435.1-201ENST00000529293 1178 ntBASIC21.52■■□□□ 1.04
SNX2O60749 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.52■■□□□ 1.04
SNX2O60749 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX2O60749 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SNX2O60749 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
SNX2O60749 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SNX2O60749 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX2O60749 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX2O60749 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX2O60749 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX2O60749 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNX2O60749 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.51■■□□□ 1.03
SNX2O60749 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SNX2O60749 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX2O60749 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX2O60749 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX2O60749 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX2O60749 AC080038.3-201ENST00000623346 1952 ntBASIC21.5■■□□□ 1.03
SNX2O60749 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX2O60749 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX2O60749 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX2O60749 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNX2O60749 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SNX2O60749 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.5■■□□□ 1.03
SNX2O60749 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SNX2O60749 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX2O60749 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SNX2O60749 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
SNX2O60749 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX2O60749 AC092053.2-201ENST00000640557 1818 ntBASIC21.5■■□□□ 1.03
SNX2O60749 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX2O60749 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.5■■□□□ 1.03
SNX2O60749 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX2O60749 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX2O60749 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX2O60749 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX2O60749 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX2O60749 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX2O60749 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX2O60749 AC026271.2-201ENST00000428091 497 ntBASIC21.49■■□□□ 1.03
SNX2O60749 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX2O60749 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX2O60749 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX2O60749 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX2O60749 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX2O60749 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNX2O60749 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX2O60749 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 AC139530.1-201ENST00000575312 1977 ntBASIC21.48■■□□□ 1.03
SNX2O60749 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SNX2O60749 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 MIR572-201ENST00000384983 95 ntBASIC21.48■■□□□ 1.03
SNX2O60749 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX2O60749 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX2O60749 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SNX2O60749 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNX2O60749 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.47■■□□□ 1.03
SNX2O60749 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNX2O60749 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.47■■□□□ 1.03
SNX2O60749 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.47■■□□□ 1.03
SNX2O60749 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNX2O60749 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.47■■□□□ 1.03
SNX2O60749 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.47■■□□□ 1.03
SNX2O60749 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNX2O60749 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms