Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSX5O60225 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX5O60225 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX5O60225 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX5O60225 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX5O60225 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX5O60225 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SSX5O60225 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX5O60225 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SSX5O60225 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX5O60225 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 AC073130.3-201ENST00000624389 2278 ntBASIC18.37■□□□□ 0.53
SSX5O60225 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.37■□□□□ 0.53
SSX5O60225 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.37■□□□□ 0.53
SSX5O60225 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.37■□□□□ 0.53
SSX5O60225 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.37■□□□□ 0.53
SSX5O60225 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.37■□□□□ 0.53
SSX5O60225 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.37■□□□□ 0.53
SSX5O60225 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.37■□□□□ 0.53
SSX5O60225 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX5O60225 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX5O60225 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SSX5O60225 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SSX5O60225 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.36■□□□□ 0.53
SSX5O60225 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX5O60225 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX5O60225 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX5O60225 AC103834.1-201ENST00000520383 144 ntBASIC18.36■□□□□ 0.53
SSX5O60225 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.36■□□□□ 0.53
SSX5O60225 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.36■□□□□ 0.53
SSX5O60225 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SSX5O60225 MIR6722-201ENST00000617286 78 ntBASIC18.36■□□□□ 0.53
SSX5O60225 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX5O60225 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX5O60225 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.36■□□□□ 0.53
SSX5O60225 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SSX5O60225 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 Z98882.1-201ENST00000622160 2253 ntBASIC18.35■□□□□ 0.53
SSX5O60225 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSX5O60225 TSPY13P-201ENST00000338964 914 ntBASIC18.35■□□□□ 0.53
SSX5O60225 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 AC137630.3-201ENST00000607245 391 ntBASIC18.35■□□□□ 0.53
SSX5O60225 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SSX5O60225 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SSX5O60225 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX5O60225 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
SSX5O60225 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX5O60225 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSX5O60225 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SSX5O60225 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX5O60225 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX5O60225 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.34■□□□□ 0.53
SSX5O60225 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.34■□□□□ 0.53
SSX5O60225 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SSX5O60225 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX5O60225 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSX5O60225 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSX5O60225 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX5O60225 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX5O60225 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX5O60225 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX5O60225 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SSX5O60225 AC103724.3-201ENST00000564481 992 ntBASIC18.33■□□□□ 0.52
SSX5O60225 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.33■□□□□ 0.52
SSX5O60225 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX5O60225 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.33■□□□□ 0.52
SSX5O60225 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms