Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF13O43567 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF13O43567 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF13O43567 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF13O43567 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF13O43567 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RNF13O43567 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF13O43567 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 AC026310.3-201ENST00000625186 2373 ntBASIC19.56■□□□□ 0.72
RNF13O43567 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.56■□□□□ 0.72
RNF13O43567 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RNF13O43567 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF13O43567 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF13O43567 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF13O43567 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF13O43567 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF13O43567 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF13O43567 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
RNF13O43567 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF13O43567 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF13O43567 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF13O43567 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF13O43567 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF13O43567 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF13O43567 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RNF13O43567 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF13O43567 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF13O43567 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF13O43567 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF13O43567 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF13O43567 SERBP1P1-201ENST00000396021 1160 ntBASIC19.54■□□□□ 0.72
RNF13O43567 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.54■□□□□ 0.72
RNF13O43567 AL136116.3-201ENST00000402907 1138 ntBASIC19.54■□□□□ 0.72
RNF13O43567 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF13O43567 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
RNF13O43567 AL138724.1-201ENST00000606771 1088 ntBASIC19.54■□□□□ 0.72
RNF13O43567 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF13O43567 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF13O43567 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF13O43567 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF13O43567 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF13O43567 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF13O43567 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RNF13O43567 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 OR2I1P-207ENST00000453522 948 ntBASIC19.53■□□□□ 0.72
RNF13O43567 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF13O43567 AL031602.1-201ENST00000633169 911 ntBASIC19.53■□□□□ 0.72
RNF13O43567 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF13O43567 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF13O43567 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF13O43567 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF13O43567 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF13O43567 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF13O43567 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF13O43567 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF13O43567 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF13O43567 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF13O43567 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF13O43567 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF13O43567 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF13O43567 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF13O43567 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF13O43567 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF13O43567 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF13O43567 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF13O43567 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF13O43567 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF13O43567 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF13O43567 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.51■□□□□ 0.71
RNF13O43567 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF13O43567 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF13O43567 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF13O43567 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF13O43567 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF13O43567 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF13O43567 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF13O43567 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF13O43567 FAM99A-202ENST00000538190 1989 ntBASIC19.5■□□□□ 0.71
RNF13O43567 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF13O43567 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF13O43567 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF13O43567 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF13O43567 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF13O43567 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF13O43567 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF13O43567 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF13O43567 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms