Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PAX4O43316 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PAX4O43316 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.32■□□□□ 0.04
PAX4O43316 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PAX4O43316 AC087742.1-201ENST00000575880 1738 ntBASIC15.32■□□□□ 0.04
PAX4O43316 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
PAX4O43316 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.32■□□□□ 0.04
PAX4O43316 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.32■□□□□ 0.04
PAX4O43316 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
PAX4O43316 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.32■□□□□ 0.04
PAX4O43316 AC008764.7-201ENST00000593779 1081 ntBASIC15.32■□□□□ 0.04
PAX4O43316 AL355001.2-201ENST00000620617 1191 ntBASIC15.32■□□□□ 0.04
PAX4O43316 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.32■□□□□ 0.04
PAX4O43316 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PAX4O43316 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.32■□□□□ 0.04
PAX4O43316 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PAX4O43316 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PAX4O43316 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PAX4O43316 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PAX4O43316 AC127496.7-201ENST00000625110 1798 ntBASIC15.31■□□□□ 0.04
PAX4O43316 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.31■□□□□ 0.04
PAX4O43316 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.31■□□□□ 0.04
PAX4O43316 AC010141.3-201ENST00000456659 717 ntBASIC15.31■□□□□ 0.04
PAX4O43316 AP005435.1-201ENST00000529293 1178 ntBASIC15.31■□□□□ 0.04
PAX4O43316 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PAX4O43316 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.31■□□□□ 0.04
PAX4O43316 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PAX4O43316 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.31■□□□□ 0.04
PAX4O43316 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PAX4O43316 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.3■□□□□ 0.04
PAX4O43316 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PAX4O43316 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PAX4O43316 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.3■□□□□ 0.04
PAX4O43316 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.3■□□□□ 0.04
PAX4O43316 AC027682.1-201ENST00000562846 899 ntBASIC15.3■□□□□ 0.04
PAX4O43316 AC133561.4-201ENST00000566112 224 ntBASIC15.3■□□□□ 0.04
PAX4O43316 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PAX4O43316 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PAX4O43316 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 GUSBP5-202ENST00000510805 1989 ntBASIC15.29■□□□□ 0.04
PAX4O43316 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PAX4O43316 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PAX4O43316 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.29■□□□□ 0.04
PAX4O43316 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PAX4O43316 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 CA15P2-201ENST00000611168 834 ntBASIC15.29■□□□□ 0.04
PAX4O43316 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PAX4O43316 AL117328.2-201ENST00000624617 1940 ntBASIC15.29■□□□□ 0.04
PAX4O43316 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PAX4O43316 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PAX4O43316 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.28■□□□□ 0.04
PAX4O43316 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PAX4O43316 AC099791.1-201ENST00000416440 715 ntBASIC15.28■□□□□ 0.04
PAX4O43316 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.28■□□□□ 0.04
PAX4O43316 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.28■□□□□ 0.04
PAX4O43316 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms