Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.53■□□□□ 0.88
PCDH17O14917 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH17O14917 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH17O14917 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
PCDH17O14917 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDH17O14917 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 AC010141.3-201ENST00000456659 717 ntBASIC20.52■□□□□ 0.88
PCDH17O14917 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDH17O14917 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
PCDH17O14917 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH17O14917 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDH17O14917 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PCDH17O14917 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH17O14917 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.52■□□□□ 0.87
PCDH17O14917 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH17O14917 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH17O14917 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH17O14917 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDH17O14917 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PCDH17O14917 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDH17O14917 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH17O14917 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH17O14917 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH17O14917 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH17O14917 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
PCDH17O14917 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH17O14917 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH17O14917 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH17O14917 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDH17O14917 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
PCDH17O14917 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDH17O14917 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 AC034268.1-201ENST00000441047 882 ntBASIC20.5■□□□□ 0.87
PCDH17O14917 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDH17O14917 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 AC105233.4-201ENST00000642045 216 ntBASIC20.5■□□□□ 0.87
PCDH17O14917 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDH17O14917 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH17O14917 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH17O14917 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH17O14917 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH17O14917 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.49■□□□□ 0.87
PCDH17O14917 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH17O14917 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH17O14917 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH17O14917 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.49■□□□□ 0.87
PCDH17O14917 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH17O14917 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH17O14917 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH17O14917 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH17O14917 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 AC139530.1-201ENST00000575312 1977 ntBASIC20.48■□□□□ 0.87
PCDH17O14917 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDH17O14917 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDH17O14917 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH17O14917 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDH17O14917 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH17O14917 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH17O14917 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH17O14917 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
PCDH17O14917 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH17O14917 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms